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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015795590.1_cds_XP_016444827.1_3905
CDS Infomation

[gene=LOC107770073] [db_xref=GeneID:107770073] [protein=glycosyltransferase-like KOBITO 1] [protein_id=XP_016444827.1] [location=complement(join(14498..14782,17433..17520,17744..17790,20990..21131,21315..21502,21908..21952,22076..22210,22287..22395,22974..23026,23346..23495,24571..24918))] [gbkey=CDS]
Sequence

ATGGCGGGTCTGTACACCTCCCTCAGACCCCAACCACCTTCTTCTTCTTCATCTTCCCAA
CAATCATTCTTCTCGAAGGTTCTTCTCCTCCTAACAATCCTTCCTCTATCCTTAGCTGTC
TTTGCCTTTGTTCTTCAATGGCGTGGTGGCGGAGTTGACGATCCAATCTCCCGATGGTCA
CCTGAAGAGTCTCACAAATTTCCCGGCATGGACAGCTCTCCTCTGTCCACTGTCGCTCAC
TCTTCTTCTCACTCATCAGATTGCTCTCTCCTCGCTCATAGTAACACGCCGTCGTTTCCT
TACTACAAAGACTGGAAATTCAAACTTCATTCAGATCTCAAACCCAAGATATGTATTACA
ACCAGTACATCTGCTGGCCTAGAGCAGATCTTACCATGGATGTTCTATCATAAAGTAATT
GGGGTAACATCATTTTTGCTTTTCGTGGAAGGAAAGGCCGCATCTCCTGATGTTTCTAAA
GTCCTTGAATCCATTCCCGGAGTAAAAGTAATATACAGAACTAGAGAGCTAGAGGAGCAA
CAAGCCAAAAGCCGGATTTGGAATGAAACGTGGCTGTCGAGTTTCTTCTATAAACCTTGC
AATTATGAGCTCTTTGTGAAGCAATCTCTTAATATGGAGATGGCCATAGTGATGGCAAGG
GATGGGGGTATGGATTGGATAATTCATCTAGACACAGATGAGTTATTACACCCAGCAGGT
GCTCGAGAGTATTCTTTGAGGCAGTTGCTGCTTGATGTGCCTTCAAATGTTGACATGGTT
ATCTTTCCTAACTATGAGAGCAGTGTTGAACGAGATGACATCAAGGATCCTTTTACGGAG
GTGTCAATGTTCAAGAAGAATTATGACCATCTAACGAAGGATACATATTTTGGCATGTAT
AAAGAAGCAACCCGTGGCAATCCAAATTACTTCTTGACGTATGGCAATGGTAAAGCAGCT
GCTCGAATTCAGGACCATCTTCGTCCCAATGGGGCTCATAGATGGCATAATTACATGAAA
ACTCCGAAGGAGATCAAATTGGAGGAGGCTGCTGTTCTGCATTACACATATTCCAAGTTT
TCTGACTTGACTTCAAGACGAGATAGATGTGGTTGTAAGCCCACAAAGGATGACGTTAAG
AGATGCTTCATGTTGGAATTCGATAGATCTGCATTTATTATTGCTTCAACTGCCACAGAA
GATGAGATGTTAAACTGGTATCGTGAACATGTGGTATGGACTGACAAAGCGGTGAACCTG
AAACTATTGAGGAAAGGCATTTTAACTCGTATTTATGCTCCCATGGTTATTGTCCAAGGT
TTGAGGGAGAGTGGTGTTTTCAGTTCTATAGTTTCATCTGCTCAGAAATCTCTATCAAAG
GACAAATTTTTAGCATCCATTGAAAGTAGCAATTCATCAAAGGCTGCTGCCTCTGAGACA
CTTCCTTCGAGAAAGATTGGTAGAAATCAACATTCTCAAGCTACCAGAAGGATTTTAGAG
GAAAGTGCTTCCCACTTTGAATTTCATGAAGAAGCCGTTCCACCACGGCCACCCCCAGGC
ATAGATGAAGATGTCATAACCGAAGCGTAA

Peptide Sequence

PEP ID

XP_016444827.1
PEP Infomation

PREDICTED: glycosyltransferase-like KOBITO 1 [Nicotiana tabacum]
Sequence

MAGLYTSLRPQPPSSSSSSQQSFFSKVLLLLTILPLSLAVFAFVLQWRGGGVDDPISRWS
PEESHKFPGMDSSPLSTVAHSSSHSSDCSLLAHSNTPSFPYYKDWKFKLHSDLKPKICIT
TSTSAGLEQILPWMFYHKVIGVTSFLLFVEGKAASPDVSKVLESIPGVKVIYRTRELEEQ
QAKSRIWNETWLSSFFYKPCNYELFVKQSLNMEMAIVMARDGGMDWIIHLDTDELLHPAG
AREYSLRQLLLDVPSNVDMVIFPNYESSVERDDIKDPFTEVSMFKKNYDHLTKDTYFGMY
KEATRGNPNYFLTYGNGKAAARIQDHLRPNGAHRWHNYMKTPKEIKLEEAAVLHYTYSKF
SDLTSRRDRCGCKPTKDDVKRCFMLEFDRSAFIIASTATEDEMLNWYREHVVWTDKAVNL
KLLRKGILTRIYAPMVIVQGLRESGVFSSIVSSAQKSLSKDKFLASIESSNSSKAAASET
LPSRKIGRNQHSQATRRILEESASHFEFHEEAVPPRPPPGIDEDVITEA

Transcript Sequence

Gene sequence data has not been registered.